研究業績
原著論文
2024年
- Rational selection of morphological phenotypic traits to extract essential similarities in chemical perturbation in the ergosterol pathway.
- Ghanegolmohammadi F, Liu W, Xu T, Li Y, Ohnuki S, Kojima T, Itto-Nakama K, Ohya Y.
- Sci Rep.
- 2024 Aug 6;14(1):17093. doi: 10.1038/s41598-024-67634-1.
- Systematic data analysis pipeline for quantitative morphological cell phenotyping.
- Ghanegolmohammadi F, Eslami M, Ohya Y.
- Comput Struct Biotechnol J.
- 2024 July 14;23:2949-2962. doi: 10.1016/j.csbj.2024.07.012.
- Application of unimodal probability distribution models for morphological phenotyping of budding yeast.
- .Ohya Y*, Ghanegolmohammadi F, Itto-Nakama K.
- FEMS Yeast Res.
- 2024 Jan 9;24:foad056. doi: 10.1093/femsyr/foad056.
2023年
- Prediction of ethanol fermentation under stressed conditions using yeast morphological data.
- Itto-Nakama K, Watanabe S, Ohnuki S, Kondo N, Kikuchi R, Nakamura T, Ogasawara W, Kasahara K, Ohya Y*.
- J Biosci Bioeng.
- 2023 Mar;135(3):210-216. doi: 10.1016/j.jbiosc.2022.12.008.
- Targeted mutations produce divergent characteristics in pedigreed sake yeast strains.
- Klinkaewboonwong N, Ohnuki S, Chadani T, Nishida I, Ushiyama Y, Tomiyama S, Isogai A, Goshima T, Ghanegolmohammadi F, Nishi N, Kitamoto K, Akao T, Hirata D*, and Ohya Y*.
- Microorganisms.
- 2023, 11(5), 1274. doi.org/10.3390/microorganisms11051274
- Is AI essential? Examining the need for deep learning in image-activated sorting of Saccharomyces cerevisiae.
- Hayashi M, Ohnuki S, Tsai Y, Kondo N, Zhou Y, Zhang H, Ishii NT, Ding T, Herbig M, Isozaki A*, Ohya Y*, Goda K*.
- Lab Chip.
- 2023 Sep 26;23(19):4232-4244. doi: 10.1039/d3lc00556a.
2022年
- Jerveratrum-type steroidal alkaloids inhibit β-1,6-glucan biosynthesis in fungal cell walls.
- Kubo K, Itto-Nakama K*, Ohnuki S, Yashiroda Y, Li SC, Kimura H, Kawamura Y, Shimamoto Y, Tominaga KI, Yamanaka D, Adachi Y, Takashima S, Noda Y, Boone C, Ohya Y*.
- Microbiol Spectr.
- 2022 Jan 12;10(1):e0087321. doi: 10.1128/spectrum.00873-21.
- High-throughput platform for yeast morphological profiling predicts the targets of bioactive compounds.
- Ohnuki S#, Ogawa I#, Itto-Nakama K, Lu F, Ranjan A, Kabbage M, Gebre AA, Yamashita M, Li SC, Yashiroda Y, Yoshida S, Usui T, Piotrowski JS, Andrews B, Boone C, Brown GW, Ralph J, Ohya Y*.
- NPJ Syst Biol Appl.
- 2022 Jan 27;8(1):3. doi: 10.1038/s41540-022-00212-1.
- Assignment of unimodal probability distribution models for quantitative morphological phenotyping.
- Ghanegolmohammadi F, Ohnuki S, Ohya Y*.
- BMC Biol.
- 2022 Mar 31;20:81. doi: 10.1186/s12915-022-01283-6.
- S-adenosyl-L-homocysteine extends lifespan through methionine restriction effects.
- Ogawa T, Masumura K, Kohara Y, Kanai M, Soga T, Ohya Y, Blackwell TK, Mizunuma M.
- Aging Cell
- 2022 Apr 7;e13604. doi: 10.1111/acel.13604.
- Deep imaging flow cytometry.
- Huang K, Matsumura H, Zhao Y, Herbig M, Yuan D, Mineharu Y, Harmon J, Findinier J, Yamagishi M, Ohnuki S, Nitta N, Grossman AR, Ohya Y, Mikami H, Isozaki A, Goda K.
- Lab Chip.
- 2022 Mar 1;22(5):876-889. doi: 10.1039/d1lc01043c.
- Intelligent sort-timing prediction for image-activated cell sorting.
- Zhao Y, Isozaki A, Herbig M, Hayashi M, Hiramatsu K, Yamazaki S, Kondo N, Ohnuki S, Ohya Y, Nitta N, and Goda K.
- Cytometry Part A
- 2022 June 29. doi: 10.1002/cyto.a.24664.
- Multifarious Translational Regulation during Replicative Aging in Yeast .
- Zhao T#, Chida A#, Shichino Y#, Choi D, Mizunuma M, Iwasaki S, Ohya Y*.
- J Fungi (Basel)
- 2022 Sep 5; 8(9), 938. doi.org/10.3390/jof8090938.
- BIONIC: biological network integration using convolutions.
- Forster DT, Li SC, Yashiroda Y, Yoshimura M, Li Z, Isuhuaylas LAV, Itto-Nakama K, Yamanaka D, Ohya Y, Osada H, Wang B, Bader GD, Boone C.
- Nature Methods
- 2022 Oct 3. doi: 10.1038/s41592-022-01616-x.
2021年
- Atg15 in Saccharomyces cerevisiae consists of two functionally distinct domains.
- Hirata E, Shirai K, Kawaoka T, Sato K, Kodama F, Suzuki K.
- Mol. Biol. Cell
- 2021 Apr 15;32(8):645-663. doi: 10.1091/mbc.E20-07-0500. Epub 2021 Feb 24.
- Genome editing to generate Sake yeast strains with eight mutations that confer excellent brewing characteristics.
- Chadani T, Ohnuki S, Isogai A, Goshima T, Kashima M, Ghanegolmohammadi F, Nishi T, Hirata D, Watanabe D, Kitamoto K, Akao T, Ohya Y*.
- Cells
- 2021 May 24;10(6):1299. doi: 10.3390/cells10061299.
- Poacic acid, a beta-1,3-glucan-binding antifungal agent, inhibits cell-wall remodeling and activates transcriptional responses regulated by the cell-wall integrity and high-osmolarity glycerol pathways in yeast.
- Garcìa R#, Itto-Nakama K#, Rodrìguez-Peña JM#, Chen X, Sanz AB, de Lorenzo A, Pavón-Vergés M, Kubo K, Ohnuki S, Nombela C, Popolo L, Ohya Y*, Arroyo J*.
- FASEB J.
- 2021 Sep;35(9):e21778. doi: 10.1096/fj.202100278R.
- Defining functions of mannoproteins in Saccharomyces cerevisiae by high-dimensional morphological phenotyping.
- Ghanegolmohammadi F, Okada H, Liu Y, Itto-Nakama K, Ohnuki S, Savchenko A, Bi E, Yoshida S, Ohya Y*.
- J Fungi (Basel)
- 2021 Sep 17;7(9):769. doi: 10.3390/jof7090769.
- Are droplets really suitable for single-cell analysis? A case study on yeast in droplets.
- Nakagawa Y#, Ohnuki S#, Kondo N, Itto-Nakama K, Ghanegolmohammadi F, Isozaki A*, Ohya Y*, Goda K*
- Lab Chip.
- 2021 Sep 28;21(19):3793-3803. doi: 10.1039/D1LC00469G
- AI-based forecasting of ethanol fermentation using yeast morphological data.
- Itto-Nakama K#, Watanabe S#, Kondo N#, Ohnuki S#, Kikuchi R, Nakamura T, Ogasawara W, Kasahara K*, Ohya Y*.
- Biosci Biotechnol Biochem.
- 2021 Dec 22;86(1):125-134. doi: 10.1093/bbb/zbab188
2020年
- Phase separation organizes the site of autophagosome formation.
- Fujioka Y, Alam JM, Noshiro D, Mouri K, Ando T, Okada Y, May AI, Knorr RL, Suzuki K, Ohsumi Y, Noda NN.
- Nature
- 2020 Feb;578(7794):301-305. doi: 10.1038/s41586-020-1977-6. Epub 2020 Feb 5.
- Callose synthesis suppresses cell death induced by low-calcium conditions in leaves.
- Shikanai Y, Yoshida R, Hirano T, Enomoto Y, Li B, Asada M, Yamagami M, Yamaguchi K, Shigenobu S, Tabata R, Sawa S, Okada H, Ohya Y, Kamiya T, Fujiwara T.
- Plant Physiol.
- 2020 Feb 5. pii: pp.00784.2019. doi: 10.1104/pp.19.00784. [Epub ahead of print]
- Virtual-freezing fluorescence imaging flow cytometry.
- Mikami H, Kawaguchi M, Huang CJ, Matsumura H, Sugimura T, Huang K, Lei C, Ueno S, Miura T, Ito T, Nagasawa K, Maeno T, Watarai H, Yamagishi M, Uemura S, Ohnuki S, Ohya Y, Kurokawa H, Matsusaka S, Sun CW, Ozeki Y, Goda K.
- Nat Commun.
- 2020 Mar 6;11(1):1162. doi: 10.1038/s41467-020-14929-2.
- Genetic profiling of protein burden and nuclear export overload.
- Kintaka R, Makanae K, Namba S, Kato H, Kito K, Ohnuki S, Ohya Y, Andrews BJ, Boone C, Moriya H.
- Elife
- 2020 Nov 4;9:e54080. doi: 10.7554/eLife.54080.
- Sequentially addressable dielectrophoretic array for high-throughput sorting of large-volume biological compartments.
- Isozaki A, Nakagawa Y, Loo MH, Shibata Y, Tanaka N, Setyaningrum DL, Park JW, Shirasaki Y, Mikami H, Huang D, Tsoi H, Riche CT, Ota T, Miwa H, Kanda Y, Ito T, Yamada K, Iwata O, Suzuki K, Ohnuki S, Ohya Y, Kato Y, Hasunuma T, Matsusaka S, Yamagishi M, Yazawa M, Uemura S, Nagasawa K, Watarai H, Di Carlo D, Goda K.
- Sci Adv.
- 2020 May 29;6(22):eaba6712. doi: 10.1126/sciadv.aba6712. eCollection 2020 May.
- Intelligent image-activated cell sorting 2.0.
- Isozaki A, Mikami H, Tezuka H, Matsumura H, Huang K, Akamine M, Hiramatsu K, Iino T, Ito T, Karakawa H, Kasai Y, Li Y, Nakagawa Y, Ohnuki S, Ota T, Qian Y, Sakuma S, Sekiya T, Shirasaki Y, Suzuki N, Tayyabi E, Wakamiya T, Xu M, Yamagishi M, Yan H, Yu Q, Yan S, Yuan D, Zhang W, Zhao Y, Arai F, Campbell RE, Danelon C, Di Carlo D, Hiraki K, Hoshino Y, Hosokawa Y, Inaba M, Nakagawa A, Ohya Y, Oikawa M, Uemura S, Ozeki Y, Sugimura T, Nitta N, Goda K.
- Lab Chip.
- 2020 Jun 30;20(13):2263-2273. doi: 10.1039/d0lc00080a.
- Liquidity is a critical determinant for selective autophagy of protein condensates.
- Yamasaki A, Alam JM, Noshiro D, Hirata E, Fujioka Y, Suzuki K, Ohsumi Y, Noda NN.
- Mol Cell.
- 2020 Jan 20. pii: S1097-2765(19)30956-6. doi: 10.1016/j.molcel.2019.12.026. [Epub ahead of print]
- The kinetic landscape and interplay of protein networks in cytokinesis.
- Okada H, MacTaggart B, Ohya Y, Bi E.
- iScience
- 2020 Dec 11;24(1):101917. doi: 10.1016/j.isci.2020.101917. eCollection 2021 Jan 22.
2019年
- Genome editing to generate nonfoam-forming sake yeast strains.
- Ohnuki S, Kashima M, Yamada T, Ghanegolmohammadi F, Zhou Y, Goshima T, Maruyama JI, Kitamoto K, Hirata D, Akao T, Ohya Y.
- Biosci Biotechnol Biochem.
- 2019 Aug;83(8):1583-1593. doi: 10.1080/09168451.2019.1631146. Epub 2019 Jun 12.
- Implications of maintenance of mother-bud neck size in diverse vital processes of Saccharomyces cerevisiae.
- Kubo K, Okada H, Shimamoto T, Kimori Y, Mizunuma M, Bi E, Ohnuki S, Ohya Y.
- Current Genetics
- 2019 Feb;65(1):253-267. doi: 10.1007/s00294-018-0872-2. Epub 2018 Jul 31.
- Simulated microgravity triggers characteristic morphology and stress response in Saccharomyces cerevisiae.
- Nemoto S, Ohnuki S, Abe F, Ohya Y.
- Yeast
- 2019 Feb;36(2):85-97. doi: 10.1002/yea.3361. Epub 2018 Nov 7.
- Cucurbitacin B exerts antiaging effects in yeast by regulating autophagy and oxidative stress.
- Lin Y, Kotakeyama Y, Li J, Pan Y, Matsuura A, Ohya Y, Yoshida M, Xiang L, Qi J.
- Oxid Med Cell Longev.
- 2019 Jun 2;2019:4517091. doi: 10.1155/2019/4517091. eCollection 2019.
2018年
- High-dimensional single-cell phenotyping reveals extensive haploinsufficiency.
- Ohnuki S, Ohya Y.
- PLoS Biol.
- 2018 May 16; 16(5):e2005130
- Genetic dissection of the signaling pathway required for the cell wall integrity checkpoint.
- Sukegawa Y, Negishi T, Kikuchi Y, Ishii K, Imanari M, Ghanegolmohammadi F, Nogami S, Ohya Y.
- Journal of Cell Science
- 2018 May 31 pii: jcs.219063
- Global study of holistic morphological effectors in the budding yeast Saccharomyces cerevisiae.
- Suzuki G, Wang Y, Kubo K, Hirata E, Ohnuki S, Ohya Y.
- BMC Genomics
- 2018 Feb 20;19(1):149
- The budding yeast RSC complex maintains ploidy by promoting spindle pole body insertion.
- Sing TL, Hung MP, Ohnuki S, Suzuki G, San Luis BJ, McClain M, Unruh JR, Yu Z, Ou J, Marshall-Sheppard J, Huh WK, Costanzo M, Boone C, Ohya Y, Jaspersen SL, Brown GW.
- Journal of Cell Biology
- 2018 Jul 2;217(7):2445-2462.
- Carotenoid dynamics and lipid droplet containing astaxanthin in response to light in the green alga Haematococcus pluvialis.
- Ota S, Morita A, Ohnuki S, Hirata A, Sekida S, Okuda K, Ohya Y, Kawano S.
- Scientific Reports
- 2018 Apr 8(1):5617
- Yeast species-specific, differential inhibition of β-1,3-glucan synthesis by poacic acid and caspofungin.
- Lee KK, Kubo K, Abdelaziz JA, Cunningham I, da Silva Dantas A, Chen X, Okada H, Ohya Y, Gow NAR.
- The Cell Surface
- 2018 Sept 26; 3:12-25.
- Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interactions.
- Simpkins SW, Nelson J, Deshpande R, Li SC, Piotrowski JS, Wilson EH, Gebre AA, Safizadeh H, Okamoto R, Yoshimura M, Costanzo M, Yashiroda Y, Ohya Y, Osada H, Yoshida M, Boone C, Myers CL.
- PLoS Comput Biol.
- 2018 Oct 30; 14(10):e1006532. doi: 10.1371/journal.pcbi.1006532.
2017年
- Testing the neutral hypothesis of phenotypic evolution.
- Ho WC, Ohya Y, Zhang J.
- Proc Natl Acad Sci U S A
- 2017 Nov 14;114(46):12219-12224
- Morphometric analysis of autophagy-related structures in Saccharomyces cerevisiae.
- Kawaoka T, Ohnuki S, Ohya Y, Suzuki K.
- Autophagy
- 2017;13(12):2104-2110
- Atg4 plays an important role in efficient expansion of autophagic isolation membranes by cleaving lipidated Atg8 in Saccharomyces cerevisiae.
- Hirata E, Ohya Y, Suzuki K.
- PLOS One
- 2017 July 13. 12(7):e0181047
- Systematic analysis of Ca2+ homoeostasis in Saccharomyces cerevisiae based on chemical-genetic interaction profiles.
- Ghanegolmohammadi F, Yoshida M, Ohnuki S, Sukegawa Y, Okada H, Obara K, Kihara A, Suzuki K, Kojima T, Yachie N, Hirata D, Ohya Y.
- Mol Cell Biol.
- 2017 Nov 7;28(23):3415-3427. doi: 10.1091/mbc.E17-04-0216. Epub 2017 May 31.
- Phenotypic diagnosis of lineage and differentiation during Sake yeast breeding
- Ohnuki S, Okada H, Friedrich A, Kanno Y, Goshima T, Hasuda H, Inahashi M, Okazaki N, Tamura H, Nakamura R, Hirata D, Fukuda H, Shimoi H, Kitamoto K, Watanabe D, Schacherer J, Akao T*, Ohya Y*.
- G3: Genes, Genomes, Genetics
- 2017 Aug 7;7(8):2807-2820. doi: 10.1534/g3.117.044099.
- Functional annotation of chemical libraries across diverse biological processes
- Piotrowski JS, Li SC, Deshpande R, Simpkins SW, Nelson J, Yashiroda Y, Barber JM, Safizadeh H, Wilson E, Okada H, Gebre AA, Kubo K, Torres NP, LeBlanc MA, Andrusiak K, Okamoto R, Yoshimura M, DeRango-Adem E, van Leeuwen J, Shirahige K, Baryshnikova A, Brown GW, Hirano H, Costanzo M, Andrews B, Ohya Y, Osada H, Yoshida M, Myers CL, Boone C.
- Nat Chem Biol.
- 2017 Jul 24. nchembio.2436
- The dual activity responsible for the elongation and branching of β-(1,3)-glucan in the fungal cell wall.
- Aimanianda V, Simenel C, Garnaud C, Clavaud C, Tada R, Barbin L, Mouyna I, Heddergott C, Popolo L, Ohya Y, Delepierre M, Latge JP
- mBio
- 2017 Jun 20;8(3): e00619-17
- Promoter engineering of the Saccharomyces cerevisiae RIM15 gene for improvement of alcoholic fermentation rates under stress conditions.
- Watanabe D, Kaneko A, Sugimoto Y, Ohnuki S, Takagi H, Ohya Y.
- J Biosci Bioeng.
- 2017 Feb;123(2):183-189.
2016年
- The Late S-phase transcription factor Hcm1 is regulated through phosphorylation by the cell wall integrity checkpoint.
- Negishi T, Veis J, Hollenstein D, Sekiya M, Ammerer G, and Ohya Y.
- Mol Cell Biol.
- 2016 Jan 4;36(6):941-53. Epub 2016 Jan 4.
- Zds1/Zds2-PP2ACdc55 complex specifies signaling output from Rho1 GTPase.
- Jonasson EM, Rossio V, Hatakeyama R, Abe M, Ohya Y, and Yoshida S.
- J Cell Biol.
- 2016 Jan 4;212(1):51-61.
- Exploiting Single-Cell Quantitative Data to Map Genetic Variants Having Probabilistic Effects.
- Chuffart F, Richard M, Jost D, Burny C, Duplus-Bottin H, Ohya Y, Yvert G.
- PLoS Genet.
- 2016 Aug 1;12(8):e1006213.
- Large-Scale Survey of Intraspecific Fitness and Cell Morphology Variation in a Protoploid Yeast Species.
- Jung PP#, Sigwalt A#, Ohnuki S#, de Montigny J, Ohya Y, Schacherer J.
- G3 (Bethesda).
- 2016 Apr 7;6(4):1063-71.
- Identification of a mutation causing a defective spindle assembly checkpoint in high ethyl caproate-producing sake yeast strain K1801.
- Goshima T, Nakamura R, Kume K, Okada H, Ichikawa E, Tamura H, Hasuda H, Inahashi M, Okazaki N, Akao T, Shimoi H, Mizunuma M, Ohya Y, Hirata D.
- Biosci Biotechnol Biochem.
- 2016 Aug;80(8):1657-62. Epub 2016 May 18.
- A global genetic interaction network maps a wiring diagram of cellular function.
- Costanzo M, VanderSluis B, Koch EN,Baryshnikova A, Pons C, Tan G,Wang W, Usaj M, Hanchard J, Lee SD, Pelechano V, Styles EB,Billmann M, van Leeuwen J, van Dyk N, Lin ZY, Kuzmin E, Nelson J, Piotrowski JS, Srikumar T, Bahr S, Chen Y, Deshpande R, Kurat CF, Li SC, Li Z, Mattiazzi Usaj M, Okada H, Pascoe N, San Luis BJ, Sharifpoor S, Shuteriqi E, Simpkins SW, Snider J, Suresh HG, Tan Y, Zhu H, Malod-Dognin N, Janjic V, Przulj N, Troyanskaya OG, Stagljar I, Xia T, Ohya Y, Gingras AC, Raught B, Boutros M, Steinmetz LM, Moore CL, Rosebrock AP, Caudy AA, Myers CL, Andrews B, Boone C.
- Science
- 2016 Sep 23;353(6306).
- Examination and disruption of the cell wall.
- Okada H, Kono K, Neiman AM, and Ohya Y.
- Cold Spring Harbor Protocols
- Aug 1;2016(8):pdb.top078659.
- Local and Acute Disruption of the Yeast Cell Surface.
- Kono K, Okada H, Ohya Y.
- Cold Spring Harb Protoc.
- 2016 Aug 1;2016(8):pdb.prot085266.
- Assay for Spore Wall Integrity Using a Yeast Predator.
- Okada H, Neiman AM, Ohya Y.
- Cold Spring Harb Protoc.
- 2016 Aug 1;2016(8):pdb.prot085258.
- Fluorescent Labeling of Yeast Cell Wall Components.
- Okada H, Ohya Y.
- Cold Spring Harb Protoc.
- 2016 Aug 1;2016(8):pdb.prot085241.
2015年
- The plant derived, antifungal agent poacic acid targets β-1,3-glucan.
- Piotrowski J#, Okada H#, Lu F, Li S, Hinchman L, Ranjan A, Smith D, Higbee A, Ulbrich A, Coon J, Deshpande R, Bukhman Y, McIlwain S, Ong I, Myers C, Boone C, Landick R, Ralph J, Kabbage M, and Ohya Y.
- Proc Natl Acad Sci U S A.
- 2015 Mar 24;112(12):E1490-7. Epub 2015 Mar 9.
- Casein kinase 1γ ensures monopolar growth polarity under incomplete DNA replication downstream of Cds1 and calcineurin in fission yeast.
- Koyano T, Konishi M, Martin SG, Ohya Y, Hirata D, Toda T, and Kume K.
- Mol Cell Biol.
- 2015 May;35(9):1533-42. Epub 2015 Feb 17.
- Visualization of Atg3 during autophagosome formation in Saccharomyces cerevisiae.
- Ngu MP, Hirata E, and Suzuki K.
- J Biol Chem.
- 2015 Mar 27;290(13):8146-53. Epub 2015 Feb 2.
- Single-cell phenomics in budding yeast.
- Ohya Y, Kimori Y, Okada H, and Ohnuki S.
- Mol Biol Cell.
- 2015 Nov 5;26(22):3920-5.
- Isolation of a spontaneous cerulenin-resistant sake yeast with both high ethyl caproate-producing ability and normal checkpoint integrity
- Tamura H*, Okada H, Kume K, Goshima T, Nakamura R, Akao T, Shimoi H, Mizunuma M, Ohya Y, and Hirata D*
- Biosci. Biotechnol. Biochem.
- 2015;79(7):1191-9. Epub 2015 Mar 19.
- Profiling of the effects of antifungal agents on yeast cells based on morphometric analysis.
- Gebre AA, Okada H, Kim C, Kubo K, Ohnuki S, Ohya Y.
- FEMS Yeast Res.
- 2015 Aug;15(5):fov040. Epub 2015 Jun 10.
- Inhibitory role of Greatwall-like protein kinase Rim15p in alcoholic fermentation via upregulating the UDP-glucose synthesis pathway in Saccharomyces cerevisiae.
- Watanabe D, Zhou Y, Hirata A, Sugimoto Y, Takagi K, Akao T, Ohya Y, Takagi H, and Shimoi H.
- Appl Environ Microbiol.
- 2015 Oct 23;82(1):340-51.
- Quantification of cell, actin and nuclear DNA morphology with high-throughput microscope and CalMorph.
- Okada H, Ohnuki S, and Ohya Y.
- Cold Spring Harbor Protocols
- 2015 Apr 1;2015(4):408-12.
- Image-based prediction of drug target in yeast.
- Ohnuki S, Okada H, and Ohya Y.
- Methods Mol Biol.
- 2015;1263:319-27.
2014年
- Vanillin causes the activation of Yap1 and mitochondrial fragmentation in Saccharomyces cerevisiae.
- Nguyen TTM, Iwaki A, Ohya Y and Izawa S.
- Journal of Bioscience and Bioengineering
- 2014 Jan;117(1):33-8. Epub 2013 Jul 11
- Distinct roles of cell wall biogenesis in yeast morphogenesis as revealed by multivariate analysis of high-dimensional morphometric data.
- Okada H, Ohnuki S, Roncero C, Konopka JB, Ohya Y.
- Molecular Biology of the Cell
- 2014 Jan;25(2):222-33 Epub 2013 Nov 20
- Proteomic profiling of autophagosome cargo in Saccharomyces cerevisiae.
- Suzuki K, Nakamura S, Morimoto M, Fujii K, Noda NN, Inagaki F, Ohsumi Y.
- PLoS One
- 2014 Mar 13;9(3):e91651.
- Dynamic changes in brewing yeast cells in culture revealed by statistical analyses of yeast morphological data.
- Ohnuki S, Enomoto K, Yoshimoto H and Ohya Y.
- Journal of Bioscience and Bioengineering
- 2014 Mar;117(3):278-84. Epub 2013 Sep 6
- Hyperspectral imaging techniques for the characterization of Haematococcus pluvialis (Chlorophyceae).
- Nogami S, Ohnuki S and Ohya Y.
- Journal of Phycology
- 2014 Oct;50(5):939-47. Epub 2014 Sep 17
- Unveiling nonessential gene deletions that confer significant morphological phenotypes beyond natural yeast strains.
- Yang M, Ohnuki S, Ohya Y.
- BMC Genomics
- 2014 Oct 25;15:932
2013年
- Vanillin Inhibits Translation and Induces Messenger Ribonucleoprotein (mRNP) Granule Formation in Saccharomyces cerevisiae: Application and Validation of High-Content, Image-Based Profiling.
- Iwaki A, Ohnuki S, Suga Y, Izawa S and Ohya Y.
- PLoS ONE
- 2013 Apr 24;8(4):e61748.
- Single-cell phenomics reveals intra-species variation of phenotypic noise in yeast.
- Yvert G, Ohnuki S, Nogami S, Imanaga Y, Fehrmann S, Schacherer J and Ohya Y.
- BMC systems biology
- 2013 Jul 3;7(1):54.
- Profilin is required for Ca2+ homeostasis and Ca2+-modulated bud formation in yeast.
- Yoshida M, Ohnuki S, Yashiroda Y and Ohya Y.
- Molecular Genetics and Genomics
- 2013 Aug;288(7-8):317-28. Epub 2013 May 26.
- Organelle acidification is important for localization of vacuolar proteins in Saccharomyces cerevisiae.
- Matsumoto R, Suzuki S and Ohya Y
- Protoplasma
- 2013 Dec;250(6):1283-93. Epub 2013 May 25.
- Image-Based Monitoring System for Green Algal Haematococcus pluvialis (Chlorophyceae) Cells during Culture.
- Ohnuki S, Nogami S, Ota S, Watanabe K, Kawano S and Ohya Y.
- Plant and Cell Physiology
- 2013 Nov;54(11):1917-29. Epub 2013 Sep 20.
2010年
- Fission yeast GC kinase Ppk11 interacts with Pmo25 and plays an auxiliary role in concert with the morphogenesis Orb6 network (MOR) in cell morphogenesis.
- Goshima T, Kume K, Koyano T, Ohya Y, Toda T, Hirata D.
- The Journal of Biological Chemistry
- 2010 Nov 5;285(45):35196-205. Epub 2010 Sep 7.
- Role of bottom-fermenting brewer's yeast KEX2 in high temperature resistance and poor proliferation at low temperatures
- Yamagishi H, Ohnuki S, Nogami S, Ogata T and Ohya Y
- The Journal of General and Applied Microbiology
- Vol. 56 (2010) , No. 4 pp.297-312
- Knr4 N-terminal domain controls its localization and function during sexual differentiation and vegetative growth.
- Dagkessamanskaia A, Azzouzi KE, Kikuchi Y, Timmers T, Ohya Y, François JM and Martin YH
- Yeast
- 2010 Aug;27(8):563-74.
- High-content, image-based screening for drug targets in yeast
- Ohnuki S, Oka S, Nogami S and Ohya Y
- PLoS ONE
- 2010 Apr 14;5(4):e10177.
- Multiple Functional Domains of the Yeast 1,3-β-Glucan Synthase Subunit Fks1p Revealed by Quantitative Phenotypic Analysis of Temperature-Sensitive Mutants
- Okada H, Abe M, Asakawa-Minemura M, Hirata A, Qadota H, Morishita K, Ohnuki S, Nogami S, Ohya Y
- Genetics
- 2010 Apr;184(4):1013-24. Epub 2010 Feb 1.
2009年
- Comprehensive and quantitative analysis of yeast deletion mutants defective in apical and isotropic bud growth
- Watanabe M, Watanabe D, Nogami S, Morishita S, Ohya Y
- Current Genetics
- 2009 May 55(4);365-80. Epub 2009 May 24.
- Multidimensional quantification of subcellular morphology of Saccharomyces cerevisiae using CalMorph, the high-throughput image-processing program
- Negishi T, Nogami S, Ohya Y.
- Journal of Biotechnology
- 2009 May 20;141(3-4):109-17. Epub 2009 Mar 31.
- A microfluidic device to acquire high-magnification microphotographs of yeast cells
- Ohnuki S, Nogami S, Ohya Y.
- Cell Division
- 2009 Mar 24;4:5. Epub 2009 Mar 24.
- Novel 24-membered macrolides, JBIR-19 and -20 isolated from Metarhizium sp. fE61
- Kozone I, Ueda J, Watanabe M, Nogami S, Nagai A, Inaba S, Ohya Y, Takagi M, Shin-ya K
- Journal of Antibiotics
- 2009 Mar;62(3):159-62. Epub 2009 Feb 6.
2007年
- Conditional genomic rearrangement by designed meiotic recombination using VDE (PI-SceI) in yeast.
- Fukuda T, Ohya Y, Ohta K.
- Mol Genet Genomics
- 2007 Oct;278(4):467-78. Epub 2007 Jun 22.
- Diversity of Ca2+-induced morphology revealed by morphological phenotyping of Ca2+-sensitive mutants of Saccharomyces cerevisiae.
- Ohnuki S, Nogami S, Kanai H, Hirata D, Nakatani Y, Morishita S, Ohya Y.
- Eukaryotic Cell
- 2007 May;6(5):817-30. Epub 2007 Mar 9.
- Genetic complexity and QTL mapping of yeast morphological traits.
- Nogami S, Ohya Y, Yvert G
- PLOS Genet.
- 2007 Feb 23;3(2):e31
- Involvement of small GTPase Rho1p in cell size control in yeast.
- Kikuchi Y, Mizuuchi E, Nogami S, Morishita S, and Ohya Y.
- FEMS Yeast Res.
- 2007 Jun;7(4):569-78. Epub 2007 Jan 16.
- Homologous subunits of yeast 1,3-beta-glucan synthase are important for spore wall assembly in Saccharomyces cerevisiae.
- Ishihara S, Hirata A, Nogami S, Beauvais A, Latge JP, Ohya Y.
- Eukaryotic Cell
- 2007 Feb;6(2):143-56. Epub 2006 Dec 8.
2006年
- Polo-like kinase Cdc5 controls the local activation of Rho1 to promote cytokinesis.
- Yoshida S, Kono K, Lowery DM, Bartolini S, Yaffe MB, Ohya Y, Pellman D.
- Science
- 2006 Jul 7;313(5783):108-11. Epub 2006 Jun 8.
- Exploring the mode-of-action of bioactive compounds by chemical-genetic profiling in yeast.
- Parsons AB, Lopez A, Givoni IE, Williams DE, Gray CA, Porter J, Chua G, Sopko R, Brost RL, Ho CH, Wang J, Ketela T, Brenner C, Brill JA, Fernandez GE, Lorenz TC, Payne GS, Ishihara S, Ohya Y, Andrews B, Hughes TR, Frey BJ, Graham TR, Andersen RJ, Boone C.
- Cell
- 2006 Aug 11;126(3):611-25.
- Investigation of the mechanism of meiotic DNA cleavage by VMA1-derived endonuclease uncovers a meiotic alteration in chromatin structure around the target site.
- Fukuda T, Ohta K, Ohya Y.
- Eukaryot Cell.
- 2006 Jun;5(6):981-90.
- Evaluation of image processing programs for accurate measurement of budding and fission yeast morphology.
- Suzuki, G., Sawai, H., Ohtani, M., Nogami, S., Sano-Kumagai, F., Saka, A., Yukawa, M., Saito, TL., Sese, J., Hirata, D,. Morishita, S., Ohya, Y.
- Curr Genet.
- 2006 Apr;49(4):237-47. Epub 2006 Jan 6.
- Recruitment of RecA homologs Dmc1p and Rad51p to the double-strand break repair site initiated by meiosis-specific endonuclease VDE (PI-SceI).
- Fukuda T, Ohya Y.
- Mol Genet Genomics.
- 2006 Feb;275(2):204-14. Epub 2005 Dec 9.
2005年
- High-dimensional and large-scale phenotyping of yeast mutants.
- Ohya, Y., Sese, J., Yukawa, M., Sano, F., Nakatani, Y., Saito, TL., Saka. A., Fukuda, T.,
Ishihara, S., Oka, S., Suzuki, G., Watanabe, M., Hirata, A., Ohtani, M., Sawai, H.,
Fraysse, N., Latge, JP., Francois, JM., Aebi, M., Tanaka, S., Muramatsu, S., Araki, H.,
Sonoike, K., Nogami, S., Morishita, S.
- Proc Natl Acad Sci U S A.
- 2005 Dec 27;102(52):19015-20. Epub 2005 Dec 19.
- Piperazine propanol derivative as a novel antifungal targeting 1,3-beta-D-glucan synthase.
- Kondoh, O., Inagaki, Y., Fukuda, H., Mizuguchi, E., Ohya, Y., Arisawa, M., Shimma, N., Aoki, Y., Sakaitani, M., Watanabe, T.
- Biol Pharm Bull.
- 2005 Nov;28(11):2138-41.
- Data Mining Tools for Saccharomyces Cerevisiae Morphological Database.
- Saito, T., Sese, J., Nakatani, Y., Sano F., Yukawa, M., Ohya, Y., and Morishita S.
- Nuc. Acid Res.
- 2005 Jul 1;33(Web Server issue):W753-7.
- Molecular dissection of ARP1 regions required for nuclear migration and cell wall integrity checkpoint functions in Saccharomyces cerevisiae.
- Igarashi R, Suzuki M, Nogami S, Ohya Y.
- Cell Struct Funct.
- 2005 30(2):57-67.
- Involvement of actin and polarisome in morphological change during spore germination of Saccharomyces cerevisiae.
- Kono, K., Matsunaga, R., Hirata, A., Suzuki, G., Abe, M., and Ohya, Y.
- Yeast
- 2005 Jan 30;22(2):129-39.
- Mitochondria-specific RNA-modifying enzymes responsible for the biosynthesis of the wobble base in mitochondrial tRNAs: Implications for the molecular pathogenesis of human mitochondrial diseases.
- Umeda, N., Suzuki, T., Yukawa, M., Ohya, Y., Shindo, H., Watanabe, K., and Suzuki, T.
- J. Biol. Chem.
- 2005 Jan 14;280(2):1613-24. Epub 2004 Oct 26.
2004年
- Dynactin complex is involved in a checkpoint to monitor cell wall synthesis in Saccharomyces cerevisiae.
- Suzuki, M., Igarashi, R., Sekiya, M., Utsugi, T., Morishita, S., Yukawa, M. and Ohya, Y.
- Nat. Cell Biol.
- 2004 6: 861-71.
- A novel mechanism of intragenic complementation between Phe to Ala calmodulin mutations.
- Okano, H. and Ohya, Y.
- J. Biochem.
- 2004 135:289-295.
- Cell shape and growth of budding yeast cells in restrictive microenvironments.
- Suzuki, M., Asada, Y., Watanabe, D., and Ohya Y.
- Yeast
- 2004 21:983-9.
- Molecular mechanism of vde-initiated intein homing in yeast nuclear genome.
- Fukuda T, Nagai Y, Ohya Y.
- Adv Biophys.
- 2004 38:215-232.
- SCMD:Saccaromyces cerevisiae morphological database.
- Saito, T.L., Ohtani, M., Sawai, H., Sano, F., Saka, A., Watanabe, D., Yukawa, M., Ohya, Y., and Morishita, S.
- Nuc. Acid Res.
- 2004 32:D319-22.
- Analysis of the molecular interaction of the farnesyl moiety of transducin through use of a photoreactive farnesyl analog.
- Hagiwara, K., Wada, A., Katadae, M., Ito, M., Ohya, Y., Casey, P. J., and Fukada, Y.
- Biochemstry
- 2004 43:300-309.
- Development of Image Processing Program for Yeast Cell Morphology.
- Ohtani, M., Sano, F., Saka, A., Ohya, Y., and Morishita, S.
- J. Bioinfo. Comput. Biol.
- 2004 1:695-709.
2003年
- Overexpression of S-adenosylmethionine decarboxylase (SAMDC) in Xenopus embryos activates maternal program of apoptosis as a "fail-safe" mechanism of early embryogenesis.
- Kai, M., Kaito, C., Fukamachi, H., Higo, T., Takayama, E., Hara, H., Ohya, Y., Igarashi, K. and Shiokawa, K.
- Cell Res.
- 2003 13:147-158.
- Lack of GTP-bound Rho1p in secretory vesicles of Saccharomyces cerevisiae.
- Abe, M., Qadota, H., Hirata, A. and Ohya, Y.
- J. Cell. Biol.
- 2003 162: 85-97.
- Binding of calmodulin to Nuf1p is required for karyogamy in Saccharomyces cerevisiae.
- Okano, H. and Ohya, Y.
- Mol. Genet. Genomics
- 2003 269:649-57
- VDE-initiated intein homing in Saccharomyces cerevisiae proceeds in a meiotic recombination-like manner.
- Fukuda, T., Nogami, S. and Ohya, Y.
- Genes. Cells.
- 2003 8: 587-602.
- Occurrence, horizontal transfer and degeneration of VDE intein family in Saccharomycete yeasts.
- Okuda Y., Sasaki, D., Nogami, S., Kaneko, Y., Ohya, Y. and Anraku, Y.
- Yeast
- 2003 20: 563-573.
- Karyopherin-Mediated Nuclear Import of the Homing Endonuclease VMA1-Derived Endonuclease Is Required for Self-Propagation of the Coding Region.
- Nagai, Y, Nogami, S., Kumagai-Sano, F. and Ohya, Y.
- Mol. Cell. Biol.
- 2003 23: 1726-1736.
2002年
- Movement of yeast 1,3-β-glucan synthase is essential for uniform cell wall synthesis.
- Utsugi, T., Minemura, M., Hirata, A., Abe, M., Watanabe, D. and Ohya, Y.
- Genes. Cells
- 2002 7: 1-9.
- Protein-splicing reaction via a thiazolidine intermediate: crystal structure of the VMA1-derived endonuclease bearing the N and C-terminal propeptides.
- Mizutani, R., Nogami, S., Kawasaki, M., Ohya, Y., Anraku, Y. and Satow, Y.
- J. Mol. Biol.
- 2002 316: 919-929.
- Mutations in Fks1p affect the cell wall content of β-1,3- and β-1,6-glucan in Saccharomyces cerevisiae.
- Dijkgraaf, G. J. P., Abe, M., Ohya, Y. and Bussey, H.
- Yeast
- 2002 19: 671-690.
- Homing at an Extragenic Locus Mediated by VDE (PI-SceI) of Saccharomyces cerevisiae.
- Nogami, S., Fukuda, T., Nagai, Y., Yabe, S., Sugiura, M., Mizutani, R., Satow, Y., Anraku, Y. and Ohya, Y.
- Yeast
- 2002 19: 773-782.
- Dissection of Upstream Regulatory Components of the Rho1p Effector, 1,3-β-Glucan Synthase, in Saccharomyces cerevisiae.
- Sekiya-K., M., Abe, M., Saka, A., Watanabe, D., Kono, K., Minemura-A., Ishihara, S., M., Watanabe, T. and Ohya, Y.
- Genetics
- 2002 162: 663-676.
2001年
- A role for the Pkc1p/Mpk1p kinase cascade in the morphogenesis checkpoint.
- Harrison, J. C., Bardes, E. S. G., Ohya, Y. and Lew, D. J.
- Nat. Cell. Biol.
- 2001 3: 417-420.
- A mutation in SPC42, which encodes a component of the spindle pole body, results in production of two-spored asci in Saccharomyces cerevisiae.
- Ishihara, S., Hirata, A., Minemura, M., Nogami, S. and Ohya, Y.
- Mol. Genet. Genomics
- 2001 265: 585-595.
- Yeast 1,3-β-Glucan Synthase Activity Is Inhibited by Phytosphingosine Localized to the Endoplasmic Reticulum.
- Abe, M., Nishida, I., Minemura, M., Qadota, H., Seyama, Y., Watanabe, T. and Ohya, Y.
- J. Biol. Chem.
- 2001 276: 26923-26930.
- Yeast Lrg1p Acts as a Specialized RhoGAP Regulating 1,3-β-Glucan Synthesis.
- Watanabe, D., Abe, M. and Ohya, Y.
- Yeast
- 2001 18: 943-951.
- Complementing Yeast rho1 Mutation Groups with Distinct Functional Defects.
- Saka, A., Abe, M., Okano, H., Minemura, M., Qadota, H., Utsugi, T., Mino, A., Tanaka, K., Takai, Y. and Ohya, Y.
- J. Biol. Chem.
- 2001 276: 46165-46171.
- Appearance of poor-fermenting variants in brewing yeast culture.
- Yamagishi, H., Yuuki, T., Kagami, N., Yokogawa, Y., Shibata, K., Minemura, M. and Ohya, Y.
- Biosci. Biotechnol. Biochem.
- 2001 65: 2361-2363.
1999年
- An FH domain-containing Bnr1p is a multifunctional protein interacting with a variety of cytoskeletal proteins in Saccharomyces cerevisiae.
- Kikyo, M., Tanaka, K., Kamei, T., Ozaki, K., Fujiwara, T., Inoue, E., Takita,Y., OhyaY. and Takai, Y.
- Oncogene
- 1999 18: 7046-7054.
- Complementation analysis in PtdInsP kinase-deficient yeast mutants demonstrates that Schizosaccharomyces pombe and murine Fab1p homologues are phosphatidylinositol 3-phosphate 5-kinases.
- McEwen, R. K., Dove, S. K., Cooke, F. T., Painter, G. F., Holmes, A. B., Shisheva, A., Ohya, Y., Parker, P. J. and Michell, R. H.
- J. Biol. Chem.
- 1999 274: 33905-33912.
- Prenylation of Rho1p is required for activation of yeast 1,3-β-glucan synthase.
- Inoue, S. B., Qadota, H., Arisawa, M., Watanabe, T. and Ohya, Y.
- J. Biol. Chem.
- 1999 274: 38119-38124.
- Recognition and cleavage of double-stranded DNA by yeast VMA1-derived endonuclease.
- Miyamoto, S., Mizutani, R., Satow, Y., Kawasaki, M., Ohya, Y. and Anraku, Y.
- Nucleic Acids Symp. Ser.
- 1999 42: 197-198.
1998年
- Phosphatidylinositol-4-Phosphate 5-Kinase Localized on the Plasma Membrane Is Essential for Yeast Cell Morphogenesis.
- Homma, K., Terui, S., Minemura, M., Qadota, H., Anraku, Y., Kanaho, Y. and Ohya, Y.
- J. Biol. Chem.
- 1998 273: 15779-15786.
- Amino Acid Residues That Define Both the Isoprenoid and CAAX Preferences of the Saccharomyces cerevisiae Protein Farnesyltransferase. Creating the perfect farnesyltransferase.
- Caplin B. E., Ohya, Y. and Marshall, M. S.
- J. Biol. Chem.
- 1998 273: 9472-9479.
- Identification of Functional Connections between Calmodulin and the Yeast Actin Cytoskeleton.
- Sekiya-K., M., Botstein, D. and Ohya, Y.
- Genetics
- 1998 150: 43-58.
- Importance of Phenylalanine Residues of Yeast Calmodulin for Target Binding and Activation.
- Okano, H., Cyert, M. and Ohya, Y.
- J. Biol. Chem.
- 1998 273: 26375-26382.
- Helliwell S. B., Schmidt, A., Ohya Y. and Hall M. N.
- The Rho1 effector Pkc1, but not Bni1, mediates signalling from Tor2 to the actin cytoskeleton.
- Curr Biol.
- 1998 5: 1211-1214.
1997年
- Applications of the long and accurate polymerase chain reaction method in yeast molecular biology: Direct sequencing of the amplified DNA and its introduction into yeast.
- Takita, Y., Takahara, M., Nogami, S., Anraku, Y. and Ohya, Y.
- Yeast
- 1997 13: 763-768.
- Molecular cloning and characterization of Drosophila genes encoding small GTPases of the rab and rho families.
- Sasamura, T., Kobayashi, T., Kojima, S., Qadota, H., Ohya, Y., Masai, I. and Hotta, Y.
- Mol. Gen. Genet.
- 1997 254: 486-494.
- Identification of three core regions essential for protein splicing of the yeast Vma1 protozyme.
- Kawasaki, M., Nogami, S., Satow, Y., Ohya, Y. and Anraku, Y.
- J. Biol. Chem.
- 1997 272: 15668-15674.
- Probing novel elements for protein splicing in the yeast Vma1 protozyme: a study of replacement mutagenesis and intragenic suppression.
- Nogami, S., Satow, Y., Ohya, Y. and Anraku, Y.
- Genetics
- 1997 147: 73-85.
- Protein splicing in the yeast Vmal protozyme: Evidence for an intramolecular reaction.
- Kawasaki, M., Satow, Y., Ohya, Y. and Anraku, Y.
- FEBS Lett.
- 412: 518-520.
- Cloning of the RHO1 gene from Candida albicans and its regulation of β-1,3-glucan synthesis.
- Kondoh, O., Tachibana, Y., Ohya, Y., Arisawa, M. and Watanabe, T.
- J. Bacteriol.
- 1997 179: 7734-7741.
1996年
- Identification of yeast RHO1 GTPase as a regulatory subunit of the 1,3-β-glucan synthase.
- Qadota, H., Python, C., Inoue, S. B., Arisawa, M., Anraku, Y., Zheng, Y., Watanabe, T., Levin, D. E. and Ohya, Y.
- Science
- 1996 272: 279-281.
- ROM7/BEM4 encodes a novel protein that interacts with the Rho1p small GTP-binding protein in Saccharomyces cerevisiae.
- Hirano, H., Tanaka, K., Ozaki, K., Arisawa, M., Watanabe, T., Imamura, H., Kohno, H., Hihara, T., Kameyama, T., Hotta, K., Qadota, H., Ohya, Y. and Takai, Y.
- Mol. Cell. Biol.
- 1996 16: 4396-4403.
- Activation of yeast protein kinase C by Rho1 GTPase.
- Kamada, Y., Qadota, H., Python, C. P., Anraku, Y., Zheng, Y., Ohya, Y. and Levin, D. E.
- J. Biol. Chem.
- 1996 271: 9193-9196.
- Signaling toward yeast 1,3-β-glucan synthesis.
- Inoue SB, Qadota H, Arisawa M, Anraku Y, Watanabe T, Ohya Y.
- Cell Struct. Funct.
- 1996 21: 395-402. Review.
- Bni1p implicated in cytoskeletal control is a putative target of Rho1p small GTP-binding protein in Saccharomyces cerevisiae.
- Kohno, H., Tanaka, K., Mino, A., Imamura, H., Fujiwara, T., Hotta, K., Qadota, H., Watanabe, T., Ohya, Y. and Takai, Y.
- EMBO J.
- 1996 15: 6060-6068.
- Folding-dependent in vitro protein splicing of the Saccharomyces cerevisiae VMA1 protozyme.
- Kawasaki, M., Makino, S., Matsuzawa, H., Satow, Y., Ohya, Y. and Anraku, Y.
- Biochem. Biophys. Res. Commun.
- 1996 222: 827-832.
- Mutational analysis of the β-subunit of yeast geranylgeranyl transferase I.
- Ohya, Y., Caplin, B. E., Qadota, H., Tibbetts, M. F., Anraku, Y., Pringle, J. R. and Marshall, M. S.
- Mol. Gen. Genet.
- 1996 252: 1-10.
- LA-PCR-based quick method for the identification of genes responsible for the complementation of Saccharomyces cerevisiae mutations.
- Ohya, Y.
- BioTechniques
- 1996 20: 772-778.
- Augmentation by calmodulin of ADP-ribosylation factor-stimulated phospholipase D activity in permeabilized rabbit peritoneal neutrophils.
- Takahashi, K., Tago, K., Okano, H., Ohya, Y., Katada, T. and Kanaho, Y.
- J. Immunol.
- 1996 156: 1229-1234.
- Yeast Cls2p/Csg2p localized on the endoplasmic reticulum membrane regulates a non-exchangeable intracellular Ca2+ pool cooperatively with calcineurin.
- Tanida, I., Takita, Y., Hasegawa, A., Ohya, Y. and Anraku, Y.
- FEBS Lett.
- 1996 379: 38-42.
総説・その他
2022年
- ゲノム編集による清酒酵母の育種
- 大矢禎一、茶谷朋哉
- 発酵・醸造食品の最前線 II(北本勝ひこ監修)シーエムシー出版
- 2022 第II編 第1章
2018年
- 出芽酵母の細胞壁研究の魅力 ー1,3-β-グルカン合成に関する最近の研究ー
- 久保佳蓮、大矢禎一
- 植物形態学会誌
- 2018 30: 59-64
- 新しい創薬ツールとしての出芽酵母
- 久保佳蓮、大矢禎一
- 酵母菌・麹菌・乳酸菌の産業応用展開 (五味勝也、 阿部敬悦監修)
- 2018 第9章
- Sake yeast then and now: Discovery of Saccharomyces sake and differentiated procedures for sake brewing.
- Ohya Y, Nemoto S
- The Japanese Journal for the History of Brewing
- Vol 33 (1): 1-7 (2018)
2017年
- 形態プロファイリングによる細胞内標的予想
- 大矢禎一、久保佳蓮
- 日本農薬学会誌
- 2017 42(1):91-98
- Current Status and Challenges of Three-Dimensional Modeling and Printing of Tissues and Organs.
- Husain SR, Ohya Y, Puri RK.
- Tissue Eng Part A
- 2017 Jun;23(11-12):471-473
2016年
- 植物由来の新しい抗真菌剤ポアシン酸研究の魅力
- 大矢禎一、岡田啓希
- 化学と生物
- 2016 54(10):704-706
2015年
- 酵母の形態情報を発酵・醸造に生かす
- 大矢禎一、渡辺大輔、 岡田啓希
- 発酵・醸造食品の最前線 (北本勝ひこ監修)
- 2015 第1章
- 日本の強みバイオテクノロジー
- 大矢禎一
- 遺伝 : 生物の科学
- 2015 69 (4); 332-337
2014年
- バニリンによるアルコール発酵阻害機序の解明
- 大矢禎一
- バイオインダストリー
- 2014 31 (1); 58-64
- CalMorph:出芽酵母細胞の画像解析システム
- 大矢禎一、岡田啓希、大貫慎輔
- 画像ラボ
- 2014 25 (7); 7-13
- Current status of multipotent mesenchymal stromal cells.
- Husain SR, Ohya Y, Toguchida J and Puri RK.
- Tissue Eng Part B Rev.
- 2014 Jun;20(3):189. Epub 2014 Mar 31.
- ビール醸造の発酵過程におけるビッグデータの活用
- 大矢禎一
- バイオサイエンスとインダストリー
- 2014 72 (5); 380-384
2013年
- 酵母からの復興―研究室で携わった復興への取組み
- 大矢禎一
- 生物工学
- 2013 91 (5); 235-237
- 出芽酵母で拡がる細胞の画像解析研究
- 大矢禎一、木森義隆
- 映像情報メディア学会誌
- 2013 67 (9); 10-15
2011年
- 酵母のかたち:定量的解析からわかること
- 大矢禎一
- 日本醸造協会誌
- 2011 106 (10); 630-637
2006年
- 「細胞の形態から遺伝子の機能を予測する」
- 野上 識・森下真一・大矢禎一
- バイオインダストリー
- Vol. 23 (2006) 49-54
2005年
- 出芽酵母の細胞壁合成をモニターする新規チェックポイント機構
- 関谷瑞穂・大矢禎一
- 実験医学増刊号
- Vol. 23 (2005) 178-182
2004年
- 出芽酵母の細胞壁合成をモニターする細胞周期チェックポイント機構
- 関谷瑞穂・五十嵐亮二・大矢禎一
- 細胞工学
- Vol. 23 (2004) 1176-1177
- 画像解析に基づく網羅的な表現型
- 渡辺大輔・大谷未稚・森下真一・大矢禎一
- 細胞工学
- Vol. 23 (2004) 439-443
- 出芽酵母における網羅的形態解析
- 渡辺大輔・大谷未稚・斉藤太郎・森下真一・大矢禎一
- 科学と生物
- Vol. 42 (2004) 240-248
2003年
- 清酒酵母の研究―90年代の研究―
- 阿部充宏・渡辺大輔・大矢禎一
- 清酒酵母・麹研究会
- (2003) 30-39
2002年
- 酵母遺伝子実験マニュアル
- 大矢禎一 監訳 板垣正・川向誠・河野享子・鈴木雅哉・長井由利・仁川純一共訳
- 丸善
- (2002) 1-220
- 生命科学の夢をふくらます─パン酵母―
- 渡辺大輔・大矢禎一
- 細胞工学
- Vol. 21 (2002) 20-24
2000年
- 細胞周期研究の新展開
- 大矢禎一・岡山博人
- 細胞工学
- Vol. 19
- (2000) 530-534
1998年
- 酵母ラボマニュアル: 酵母分子細胞生物学実験法
- 山本正幸・大矢禎一 編
- シュプリンガー・ファラーク東京
- (1998) 1-364
1997年
- 酵母の細胞壁合成はどのように制御されているか
- 門田裕志・大矢禎一
- 化学と生物
- Vol. 35 (1997) 84-90
1996年
- カルモデュリンについて―機能発現の分子メカニズム―
- 岡野浩行・大矢禎一
- 日本醸造協会誌
- Vol. 91 (1996) 27-32
- 細胞周期におけるカルモデュリンの多重機能
- 関谷真理子・大矢禎一
- 蛋白質 核酸 酵素
- 41 (1996) 1688-1694